Software & Data

Open-source software, tools, and datasets developed by the BRAINTWIN project following FAIR principles.

BRAINTWIN is committed to open science. Software and datasets will be released progressively throughout the project (2026-2029). Stay tuned for updates.

Upcoming Releases

FAIR Data Platform

Secure, federated data platform for multimodal brain tumor and SVD datasets with BIDS/OMOP harmonization.

Coming 2026

Multimodal Fusion Models

Deep learning models for integrating MRI, histopathology, omics, and clinical data into unified patient representations.

Coming 2026

Federated Learning Toolkit

Privacy-preserving federated learning framework with differential privacy and robust aggregation algorithms.

Coming 2026

Related Tools from Consortium Members

SHiVAi

Pipeline for preprocessing, AI-based segmentation, and reporting of cerebral small vessel disease biomarkers from brain MRI images.

View on GitHub

Thunder WSI Benchmark

Lightweight benchmark for comparing foundational models trained for digital pathology.

View on GitHub

PCNSL Multi-omics Analysis

Code to reproduce multi-omics analyses of primary CNS lymphoma from Ann Oncol 2023.

View on GitHub

PCNSL Microbiome Analysis

Code for gut microbiome analysis in primary CNS lymphoma.

View on GitHub

Data Resources

Multi-omics Dataset (PCNSL)

Multi-omics raw data of primary CNS lymphoma available through controlled access.

EGA Archive